It could indeed be that French immigration didn't scan OP's passport when she left France and therefore she got out of the country without trouble, but isn't it possible that her name/dob/passport number may still be in the system as someone who entered France but never left?
In my experience, half of the time they don't scan the passport on entry - often they even don't stamp them, especially when things are busy. You usually notice because they have to bend the passport so that the plastic part fits on the scanner. The scanners don't seem to work very well either, as often it takes two or three tries to get the passport scanned properly.
I.e. I'd be very surprised if not having been scan on entry or exit would create a problem later on.

